The Wakatime.com domain was registered in 2013 around the same time these covert websites were all being replaced. Also the creator of wakatime is an American living in Vienna, known to be the city of spies.
When I saw on LinkedIn that he worked for a web security contractor until September 2013, I almost flipped. But appears unrelated however unfortunately except for his general interst in WEBSEC, so another dead end.
Is wakatime ran by three letter agencies?